Changes
On 31 May 2021 at 16:28:37 UTC, Ricardo Fernandes:
-
Added resource Stable isotope measurements for archaeological humans in Japan v. 2 (CSV) to ARCHIPELAGO human stable isotope database
f | 1 | { | f | 1 | { |
2 | "author": "Mark Hudson & Ricardo Fernandes", | 2 | "author": "Mark Hudson & Ricardo Fernandes", | ||
3 | "author_email": "hudson@shh.mpg.de", | 3 | "author_email": "hudson@shh.mpg.de", | ||
4 | "creator_user_id": "a529d3d6-d77a-4797-b965-a00f60123108", | 4 | "creator_user_id": "a529d3d6-d77a-4797-b965-a00f60123108", | ||
5 | "doi": "10.48493/jyvf-5a27", | 5 | "doi": "10.48493/jyvf-5a27", | ||
6 | "ext_doi": "", | 6 | "ext_doi": "", | ||
7 | "gen": [ | 7 | "gen": [ | ||
8 | "yes" | 8 | "yes" | ||
9 | ], | 9 | ], | ||
10 | "groups": [ | 10 | "groups": [ | ||
11 | { | 11 | { | ||
12 | "description": "The IsoMemo group list datasets created by | 12 | "description": "The IsoMemo group list datasets created by | ||
13 | IsoMemo partners. Both those that are stored internally within Pandora | 13 | IsoMemo partners. Both those that are stored internally within Pandora | ||
14 | and those that are stored externally.", | 14 | and those that are stored externally.", | ||
15 | "display_name": "IsoMemo group", | 15 | "display_name": "IsoMemo group", | ||
16 | "id": "1739bd12-4cd3-48eb-8658-c1d470d0f965", | 16 | "id": "1739bd12-4cd3-48eb-8658-c1d470d0f965", | ||
17 | "image_display_url": | 17 | "image_display_url": | ||
18 | s://pandoradata.earth/uploads/group/2021-03-30-175014.746487logo.jpg", | 18 | s://pandoradata.earth/uploads/group/2021-03-30-175014.746487logo.jpg", | ||
19 | "name": "isomemo-group", | 19 | "name": "isomemo-group", | ||
20 | "title": "IsoMemo group" | 20 | "title": "IsoMemo group" | ||
21 | } | 21 | } | ||
22 | ], | 22 | ], | ||
23 | "id": "8378ee13-0cb9-4fec-95aa-d64f52d21fd0", | 23 | "id": "8378ee13-0cb9-4fec-95aa-d64f52d21fd0", | ||
24 | "isopen": true, | 24 | "isopen": true, | ||
25 | "license_id": "cc-by-sa", | 25 | "license_id": "cc-by-sa", | ||
26 | "license_title": "Creative Commons Attribution Share-Alike", | 26 | "license_title": "Creative Commons Attribution Share-Alike", | ||
27 | "license_url": "http://www.opendefinition.org/licenses/cc-by-sa", | 27 | "license_url": "http://www.opendefinition.org/licenses/cc-by-sa", | ||
28 | "maintainer": "Mark Hudson", | 28 | "maintainer": "Mark Hudson", | ||
29 | "maintainer_email": "hudson@shh.mpg.de", | 29 | "maintainer_email": "hudson@shh.mpg.de", | ||
30 | "metadata_created": "2021-02-24T14:13:23.047617", | 30 | "metadata_created": "2021-02-24T14:13:23.047617", | ||
n | 31 | "metadata_modified": "2021-05-31T16:27:14.799510", | n | 31 | "metadata_modified": "2021-05-31T16:28:37.167296", |
32 | "name": "archipelago-human-stable-isotope-database", | 32 | "name": "archipelago-human-stable-isotope-database", | ||
33 | "notes": "The dataset contains human bone and hair carbon and | 33 | "notes": "The dataset contains human bone and hair carbon and | ||
34 | nitrogen stable isotopes measurements from Japanese archaeological | 34 | nitrogen stable isotopes measurements from Japanese archaeological | ||
35 | sites covering the time span from the Upper Palaeolithic to the | 35 | sites covering the time span from the Upper Palaeolithic to the | ||
36 | mid-nineteenth century. ", | 36 | mid-nineteenth century. ", | ||
n | 37 | "num_resources": 2, | n | 37 | "num_resources": 3, |
38 | "num_tags": 5, | 38 | "num_tags": 5, | ||
39 | "organization": { | 39 | "organization": { | ||
40 | "approval_status": "approved", | 40 | "approval_status": "approved", | ||
41 | "created": "2021-02-03T17:53:29.162864", | 41 | "created": "2021-02-03T17:53:29.162864", | ||
42 | "description": "ARCHIPELAGO is an integrated archaeological and | 42 | "description": "ARCHIPELAGO is an integrated archaeological and | ||
43 | historical database of land and sea resources utilised by humans in | 43 | historical database of land and sea resources utilised by humans in | ||
44 | the Japanese Islands. ", | 44 | the Japanese Islands. ", | ||
45 | "id": "bbef4dd3-7e14-4de7-925e-8b2343542130", | 45 | "id": "bbef4dd3-7e14-4de7-925e-8b2343542130", | ||
46 | "image_url": "2021-02-21-190437.479608logo.png", | 46 | "image_url": "2021-02-21-190437.479608logo.png", | ||
47 | "is_organization": true, | 47 | "is_organization": true, | ||
48 | "name": "archipelago", | 48 | "name": "archipelago", | ||
49 | "state": "active", | 49 | "state": "active", | ||
50 | "title": "ARCHIPELAGO", | 50 | "title": "ARCHIPELAGO", | ||
51 | "type": "organization" | 51 | "type": "organization" | ||
52 | }, | 52 | }, | ||
53 | "owner_org": "bbef4dd3-7e14-4de7-925e-8b2343542130", | 53 | "owner_org": "bbef4dd3-7e14-4de7-925e-8b2343542130", | ||
54 | "private": false, | 54 | "private": false, | ||
55 | "relationships_as_object": [], | 55 | "relationships_as_object": [], | ||
56 | "relationships_as_subject": [], | 56 | "relationships_as_subject": [], | ||
57 | "resources": [ | 57 | "resources": [ | ||
58 | { | 58 | { | ||
59 | "cache_last_updated": null, | 59 | "cache_last_updated": null, | ||
60 | "cache_url": null, | 60 | "cache_url": null, | ||
61 | "created": "2021-02-24T22:09:19.603156", | 61 | "created": "2021-02-24T22:09:19.603156", | ||
62 | "description": "The data table consists of fields organized into | 62 | "description": "The data table consists of fields organized into | ||
63 | thematic groups. Each data entry is identified by a unique sequential | 63 | thematic groups. Each data entry is identified by a unique sequential | ||
64 | key (Entry ID). The data submitter may include additional comments not | 64 | key (Entry ID). The data submitter may include additional comments not | ||
65 | covered by the existing fields (Comments), and identify the data | 65 | covered by the existing fields (Comments), and identify the data | ||
66 | submitter (ID submitter).\r\n\r\nThe archaeological site and sample | 66 | submitter (ID submitter).\r\n\r\nThe archaeological site and sample | ||
67 | context are described in several fields. A site name (Site name), | 67 | context are described in several fields. A site name (Site name), | ||
68 | short site description (Site description), short description of burial | 68 | short site description (Site description), short description of burial | ||
69 | context (Context description), a context identifier as given in | 69 | context (Context description), a context identifier as given in | ||
70 | publication (Context ID), the name of the locality at which the site | 70 | publication (Context ID), the name of the locality at which the site | ||
71 | is located (Locality), of the corresponding region (Region), the site | 71 | is located (Locality), of the corresponding region (Region), the site | ||
72 | altitude in meters (Altitude), latitude (Latitude) and longitude | 72 | altitude in meters (Altitude), latitude (Latitude) and longitude | ||
73 | (Longitude) in a WGS84 metric coordinate system, whether the location | 73 | (Longitude) in a WGS84 metric coordinate system, whether the location | ||
74 | of a site could not be exactly established (Exact) and if not the | 74 | of a site could not be exactly established (Exact) and if not the | ||
75 | range in kilometres within it is expected to be located relative to | 75 | range in kilometres within it is expected to be located relative to | ||
76 | the given coordinates (Radius).\r\n\r\nEach archaeological individual | 76 | the given coordinates (Radius).\r\n\r\nEach archaeological individual | ||
77 | from which the sample was taken is identified using the identification | 77 | from which the sample was taken is identified using the identification | ||
78 | provided in the original publication (Individual ID) followed by a | 78 | provided in the original publication (Individual ID) followed by a | ||
79 | short description of the burial (Burial type). Additional sample | 79 | short description of the burial (Burial type). Additional sample | ||
80 | description includes taxon (Taxon) and the corresponding name in | 80 | description includes taxon (Taxon) and the corresponding name in | ||
81 | common language (Taxon common name). Our database currently contains | 81 | common language (Taxon common name). Our database currently contains | ||
82 | only human data but in the future we plan to expand it to include | 82 | only human data but in the future we plan to expand it to include | ||
83 | other taxa. Osteological information includes sex identification | 83 | other taxa. Osteological information includes sex identification | ||
84 | (Sex), a text description of age (Age category individual), numeric | 84 | (Sex), a text description of age (Age category individual), numeric | ||
85 | ranges in years for minimum (Min. age individual) and maximum age | 85 | ranges in years for minimum (Min. age individual) and maximum age | ||
86 | (Max. age individual), and the type of bone or hair material that | 86 | (Max. age individual), and the type of bone or hair material that | ||
87 | sampled from the archaeological individual (sample type).\r\n\r\nThe | 87 | sampled from the archaeological individual (sample type).\r\n\r\nThe | ||
88 | chronological range of the sample is given by a minimum age (Min age | 88 | chronological range of the sample is given by a minimum age (Min age | ||
89 | (95%)) and maximum age (Max age (95%)) in years BC and AD with years | 89 | (95%)) and maximum age (Max age (95%)) in years BC and AD with years | ||
90 | BC expressed by negative numbers. Age assignment followed a | 90 | BC expressed by negative numbers. Age assignment followed a | ||
91 | hierarchical approach. Whenever available we employed direct dates | 91 | hierarchical approach. Whenever available we employed direct dates | ||
92 | from samples (e.g. radiocarbon dates, in which the calibrated 95% | 92 | from samples (e.g. radiocarbon dates, in which the calibrated 95% | ||
93 | range is reported) or from coeval samples from the same archaeological | 93 | range is reported) or from coeval samples from the same archaeological | ||
94 | context. If necessary, corrections for aquatic radiocarbon reservoir | 94 | context. If necessary, corrections for aquatic radiocarbon reservoir | ||
95 | effects were applied. If no secure dating was available from the | 95 | effects were applied. If no secure dating was available from the | ||
96 | sample context, we employed the site\u2019s chronology given usually | 96 | sample context, we employed the site\u2019s chronology given usually | ||
97 | in the archaeological report. If this was also not available, we | 97 | in the archaeological report. If this was also not available, we | ||
98 | employed the full cultural range to which the sample was assigned. A | 98 | employed the full cultural range to which the sample was assigned. A | ||
99 | field was used to identify the type of employed dating method (Dating | 99 | field was used to identify the type of employed dating method (Dating | ||
100 | method). Also included were fields for uncalibrated direct radiocarbon | 100 | method). Also included were fields for uncalibrated direct radiocarbon | ||
101 | dates on sample (14C), its uncertainty (14C unc). Period tags are also | 101 | dates on sample (14C), its uncertainty (14C unc). Period tags are also | ||
102 | used to provide traditional chronological information (Period | 102 | used to provide traditional chronological information (Period | ||
103 | tags).\r\n\r\nMeasurements of stable carbon (delta 13C coll) and | 103 | tags).\r\n\r\nMeasurements of stable carbon (delta 13C coll) and | ||
104 | nitrogen (delta 15N coll) isotopic ratios in bone collagen and hair | 104 | nitrogen (delta 15N coll) isotopic ratios in bone collagen and hair | ||
105 | keratin are reported together with measurements quality indicators, | 105 | keratin are reported together with measurements quality indicators, | ||
106 | the percentage of elemental carbon (%C), the percentage of elemental | 106 | the percentage of elemental carbon (%C), the percentage of elemental | ||
107 | nitrogen (%N), the carbon to nitrogen atomic ratio (C/N), and the | 107 | nitrogen (%N), the carbon to nitrogen atomic ratio (C/N), and the | ||
108 | collagen yield for bone samples (Collagen yield).\r\n\r\nA reference | 108 | collagen yield for bone samples (Collagen yield).\r\n\r\nA reference | ||
109 | in the format author(s)/year of publication/title identified the | 109 | in the format author(s)/year of publication/title identified the | ||
110 | source publication or publications from where the data was collected | 110 | source publication or publications from where the data was collected | ||
111 | (Reference), in addition to a link to the publication whenever | 111 | (Reference), in addition to a link to the publication whenever | ||
112 | available (Link), a DOI (DOI), and the publication date or dates | 112 | available (Link), a DOI (DOI), and the publication date or dates | ||
113 | (Publication date). Macrons were not used for Japanese titles in the | 113 | (Publication date). Macrons were not used for Japanese titles in the | ||
114 | list.\r\n", | 114 | list.\r\n", | ||
115 | "format": "CSV", | 115 | "format": "CSV", | ||
116 | "hash": "", | 116 | "hash": "", | ||
117 | "id": "971c397a-1806-4b59-97e1-0915dab25428", | 117 | "id": "971c397a-1806-4b59-97e1-0915dab25428", | ||
118 | "last_modified": "2021-02-25T12:00:37.011370", | 118 | "last_modified": "2021-02-25T12:00:37.011370", | ||
119 | "metadata_modified": "2021-02-25T12:00:37.022584", | 119 | "metadata_modified": "2021-02-25T12:00:37.022584", | ||
120 | "mimetype": "text/csv", | 120 | "mimetype": "text/csv", | ||
121 | "mimetype_inner": null, | 121 | "mimetype_inner": null, | ||
122 | "name": "Stable isotope measurements for archaeological humans | 122 | "name": "Stable isotope measurements for archaeological humans | ||
123 | in Japan", | 123 | in Japan", | ||
124 | "package_id": "8378ee13-0cb9-4fec-95aa-d64f52d21fd0", | 124 | "package_id": "8378ee13-0cb9-4fec-95aa-d64f52d21fd0", | ||
125 | "position": 0, | 125 | "position": 0, | ||
126 | "resource_type": null, | 126 | "resource_type": null, | ||
127 | "size": 799850, | 127 | "size": 799850, | ||
128 | "state": "active", | 128 | "state": "active", | ||
129 | "url": | 129 | "url": | ||
130 | 71c397a-1806-4b59-97e1-0915dab25428/download/japan-human-si-data.csv", | 130 | 71c397a-1806-4b59-97e1-0915dab25428/download/japan-human-si-data.csv", | ||
131 | "url_type": "upload" | 131 | "url_type": "upload" | ||
132 | }, | 132 | }, | ||
133 | { | 133 | { | ||
134 | "cache_last_updated": null, | 134 | "cache_last_updated": null, | ||
135 | "cache_url": null, | 135 | "cache_url": null, | ||
136 | "created": "2021-05-26T18:05:45.096083", | 136 | "created": "2021-05-26T18:05:45.096083", | ||
137 | "description": "Version 2 (Excel format) of database for stable | 137 | "description": "Version 2 (Excel format) of database for stable | ||
138 | isotope measurements for archaeological humans in Japan\r\n\r\nThe | 138 | isotope measurements for archaeological humans in Japan\r\n\r\nThe | ||
139 | data table consists of fields organized into thematic groups. Each | 139 | data table consists of fields organized into thematic groups. Each | ||
140 | data entry is identified by a unique sequential key (Entry_ ID). The | 140 | data entry is identified by a unique sequential key (Entry_ ID). The | ||
141 | data submitter may include additional comments not covered by the | 141 | data submitter may include additional comments not covered by the | ||
142 | existing fields (Comments), and identify the data submitter by name | 142 | existing fields (Comments), and identify the data submitter by name | ||
143 | (ID_ submitter).\r\n\r\nThe archaeological site and sample context are | 143 | (ID_ submitter).\r\n\r\nThe archaeological site and sample context are | ||
144 | described in several fields. A site name (Site name), short site | 144 | described in several fields. A site name (Site name), short site | ||
145 | description of the type of site (Site_ description), short description | 145 | description of the type of site (Site_ description), short description | ||
146 | of burial context (Context description), a context identifier as given | 146 | of burial context (Context description), a context identifier as given | ||
147 | in original publication (Context_ ID), the name of the locality at | 147 | in original publication (Context_ ID), the name of the locality at | ||
148 | which the site is located (Locality), of the corresponding region | 148 | which the site is located (Locality), of the corresponding region | ||
149 | (Region), the site altitude in meteres (Altitude), latitude (Latitude) | 149 | (Region), the site altitude in meteres (Altitude), latitude (Latitude) | ||
150 | and longitude (Longitude) in a WGS84 metric coordinate system, whether | 150 | and longitude (Longitude) in a WGS84 metric coordinate system, whether | ||
151 | the location of a site could not be exactly established (Exact) and if | 151 | the location of a site could not be exactly established (Exact) and if | ||
152 | not the range in kilometres within it is expected to be located | 152 | not the range in kilometres within it is expected to be located | ||
153 | relative to the given coordinates (Radius).\r\n\r\nEach archaeological | 153 | relative to the given coordinates (Radius).\r\n\r\nEach archaeological | ||
154 | individual from which the sample was taken is identified using the | 154 | individual from which the sample was taken is identified using the | ||
155 | identification provided in the original publication (Individual ID) | 155 | identification provided in the original publication (Individual ID) | ||
156 | followed by a short description of the burial | 156 | followed by a short description of the burial | ||
157 | (Burial_type_skeletal_context Burial type). Additional sample | 157 | (Burial_type_skeletal_context Burial type). Additional sample | ||
158 | description includes taxon (Taxon) and the corresponding name in | 158 | description includes taxon (Taxon) and the corresponding name in | ||
159 | common language (Taxon common name). Our database dataset currently | 159 | common language (Taxon common name). Our database dataset currently | ||
160 | contains only human data but in the future we plan to expand it to | 160 | contains only human data but in the future we plan to expand it to | ||
161 | include other taxa. Osteological information includes sex | 161 | include other taxa. Osteological information includes sex | ||
162 | identification (Sex), a text description of age (Age_ category_ | 162 | identification (Sex), a text description of age (Age_ category_ | ||
163 | individual), numeric ranges in years for minimum (Min_. age_ | 163 | individual), numeric ranges in years for minimum (Min_. age_ | ||
164 | individual) and maximum age (Max_. age_ individual) biological age of | 164 | individual) and maximum age (Max_. age_ individual) biological age of | ||
165 | the individual at death, and the type of bone or hair material that | 165 | the individual at death, and the type of bone or hair material that | ||
166 | sampled from the archaeological individual (Ssample_ | 166 | sampled from the archaeological individual (Ssample_ | ||
167 | type).\r\n\r\nBiological age categories for skeletal individuals | 167 | type).\r\n\r\nBiological age categories for skeletal individuals | ||
168 | followed the published reports. These reports used standard | 168 | followed the published reports. These reports used standard | ||
169 | bioarchaeological categories based on dental and skeletal age [24]: | 169 | bioarchaeological categories based on dental and skeletal age [24]: | ||
170 | infant: birth \u2013 3 years; child: 3- 12 years; adolescent: 12-20 | 170 | infant: birth \u2013 3 years; child: 3- 12 years; adolescent: 12-20 | ||
171 | years; young adult: 20-35 years; middle adult: 35-50 years; old adult: | 171 | years; young adult: 20-35 years; middle adult: 35-50 years; old adult: | ||
172 | 50 + years. In some cases, particularly with older publications, the | 172 | 50 + years. In some cases, particularly with older publications, the | ||
173 | ages of these categories may differ slightly. The age > 55 is | 173 | ages of these categories may differ slightly. The age > 55 is | ||
174 | sometimes used for \u2018older adults\u2019 in the Japanese | 174 | sometimes used for \u2018older adults\u2019 in the Japanese | ||
175 | literature. Cases where the same values are reported for minimum and | 175 | literature. Cases where the same values are reported for minimum and | ||
176 | maximum individual ages represent average estimated age. Some of the | 176 | maximum individual ages represent average estimated age. Some of the | ||
177 | studies used here report very precise age estimates for sub-adults. In | 177 | studies used here report very precise age estimates for sub-adults. In | ||
178 | such cases our dataset follows these estimates, which are derived from | 178 | such cases our dataset follows these estimates, which are derived from | ||
179 | different methods described in the studies concerned.\r\n\r\nThe | 179 | different methods described in the studies concerned.\r\n\r\nThe | ||
180 | chronological range of the sample is given by a minimum age | 180 | chronological range of the sample is given by a minimum age | ||
181 | (Min_chronology age (95%)) and maximum age (Max_chronology age (95%)) | 181 | (Min_chronology age (95%)) and maximum age (Max_chronology age (95%)) | ||
182 | in years BC and AD with years BC expressed by negative numbers. Age | 182 | in years BC and AD with years BC expressed by negative numbers. Age | ||
183 | assignment followed a hierarchical approach. Whenever available we | 183 | assignment followed a hierarchical approach. Whenever available we | ||
184 | employed direct dates from samples (e.g. radiocarbon dates, in which | 184 | employed direct dates from samples (e.g. radiocarbon dates, in which | ||
185 | the calibrated 95% range is reported) or from coeval samples from the | 185 | the calibrated 95% range is reported) or from coeval samples from the | ||
186 | same archaeological context. If necessary, corrections for aquatic | 186 | same archaeological context. If necessary, corrections for aquatic | ||
187 | marine radiocarbon reservoir effects were applied on direct | 187 | marine radiocarbon reservoir effects were applied on direct | ||
188 | radiocarbon measurements of human bones (see below). A dataset field | 188 | radiocarbon measurements of human bones (see below). A dataset field | ||
189 | (Dietary_ model_selection) identifies the type of Bayesian model | 189 | (Dietary_ model_selection) identifies the type of Bayesian model | ||
190 | employed to estimate the dietary contributions from marine carbon.. If | 190 | employed to estimate the dietary contributions from marine carbon.. If | ||
191 | no secure dating was available from the sample context, we employed | 191 | no secure dating was available from the sample context, we employed | ||
192 | the site\u2019s chronology given usually in the archaeological report. | 192 | the site\u2019s chronology given usually in the archaeological report. | ||
193 | If this was also not available, we employed the full cultural range to | 193 | If this was also not available, we employed the full cultural range to | ||
194 | which the sample was assigned. A field was used to identify the type | 194 | which the sample was assigned. A field was used to identify the type | ||
195 | of employed dating method (Dating_ method). Also included were fields | 195 | of employed dating method (Dating_ method). Also included were fields | ||
196 | for uncalibrated direct radiocarbon dates on sample (14C), its | 196 | for uncalibrated direct radiocarbon dates on sample (14C), its | ||
197 | uncertainty (14C unc). Period tags are also used to provide | 197 | uncertainty (14C unc). Period tags are also used to provide | ||
198 | traditional chronological information (Period_ | 198 | traditional chronological information (Period_ | ||
199 | tags).\r\n\r\nMeasurements of stable carbon (delta_ 13C_ coll) and | 199 | tags).\r\n\r\nMeasurements of stable carbon (delta_ 13C_ coll) and | ||
200 | nitrogen (delta_ 15N_ coll) isotopic ratios in bone collagen and hair | 200 | nitrogen (delta_ 15N_ coll) isotopic ratios in bone collagen and hair | ||
201 | keratin are reported together with measurements quality indicators, | 201 | keratin are reported together with measurements quality indicators, | ||
202 | the percentage of elemental carbon (%C), the percentage of elemental | 202 | the percentage of elemental carbon (%C), the percentage of elemental | ||
203 | nitrogen (%N), the carbon to nitrogen atomic ratio (C/N), and the | 203 | nitrogen (%N), the carbon to nitrogen atomic ratio (C/N), and the | ||
204 | collagen yield for bone samples (Collagen_ yield).\r\n\r\nA reference | 204 | collagen yield for bone samples (Collagen_ yield).\r\n\r\nA reference | ||
205 | in the format author(s)/year of publication/title identified the | 205 | in the format author(s)/year of publication/title identified the | ||
206 | source publication or publications from where the data was collected | 206 | source publication or publications from where the data was collected | ||
207 | (Reference), in addition to a link to the publication whenever | 207 | (Reference), in addition to a link to the publication whenever | ||
208 | available (Link), a Digital object identifier as a persistent | 208 | available (Link), a Digital object identifier as a persistent | ||
209 | identifier DOI (DOI), and the publication date or dates (Publication_ | 209 | identifier DOI (DOI), and the publication date or dates (Publication_ | ||
210 | date). Macrons were not used for Japanese titles in the list.", | 210 | date). Macrons were not used for Japanese titles in the list.", | ||
211 | "format": "XLSX", | 211 | "format": "XLSX", | ||
212 | "hash": "", | 212 | "hash": "", | ||
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214 | "last_modified": "2021-05-26T18:05:45.042633", | 214 | "last_modified": "2021-05-26T18:05:45.042633", | ||
215 | "metadata_modified": "2021-05-31T16:27:14.804700", | 215 | "metadata_modified": "2021-05-31T16:27:14.804700", | ||
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219 | "name": "Stable isotope measurements for archaeological humans | 219 | "name": "Stable isotope measurements for archaeological humans | ||
220 | in Japan v. 2", | 220 | in Japan v. 2", | ||
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t | t | 229 | }, | ||
230 | { | ||||
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233 | "created": "2021-05-31T16:28:37.185134", | ||||
234 | "description": "Version 2 (CSV format) of database for stable | ||||
235 | isotope measurements for archaeological humans in Japan\r\n\r\nThe | ||||
236 | data table consists of fields organized into thematic groups. Each | ||||
237 | data entry is identified by a unique sequential key (Entry_ ID). The | ||||
238 | data submitter may include additional comments not covered by the | ||||
239 | existing fields (Comments), and identify the data submitter by name | ||||
240 | (ID_ submitter).\r\n\r\nThe archaeological site and sample context are | ||||
241 | described in several fields. A site name (Site name), short site | ||||
242 | description of the type of site (Site_ description), short description | ||||
243 | of burial context (Context description), a context identifier as given | ||||
244 | in original publication (Context_ ID), the name of the locality at | ||||
245 | which the site is located (Locality), of the corresponding region | ||||
246 | (Region), the site altitude in meteres (Altitude), latitude (Latitude) | ||||
247 | and longitude (Longitude) in a WGS84 metric coordinate system, whether | ||||
248 | the location of a site could not be exactly established (Exact) and if | ||||
249 | not the range in kilometres within it is expected to be located | ||||
250 | relative to the given coordinates (Radius).\r\n\r\nEach archaeological | ||||
251 | individual from which the sample was taken is identified using the | ||||
252 | identification provided in the original publication (Individual ID) | ||||
253 | followed by a short description of the burial | ||||
254 | (Burial_type_skeletal_context Burial type). Additional sample | ||||
255 | description includes taxon (Taxon) and the corresponding name in | ||||
256 | common language (Taxon common name). Our database dataset currently | ||||
257 | contains only human data but in the future we plan to expand it to | ||||
258 | include other taxa. Osteological information includes sex | ||||
259 | identification (Sex), a text description of age (Age_ category_ | ||||
260 | individual), numeric ranges in years for minimum (Min_. age_ | ||||
261 | individual) and maximum age (Max_. age_ individual) biological age of | ||||
262 | the individual at death, and the type of bone or hair material that | ||||
263 | sampled from the archaeological individual (Ssample_ | ||||
264 | type).\r\n\r\nBiological age categories for skeletal individuals | ||||
265 | followed the published reports. These reports used standard | ||||
266 | bioarchaeological categories based on dental and skeletal age [24]: | ||||
267 | infant: birth \u2013 3 years; child: 3- 12 years; adolescent: 12-20 | ||||
268 | years; young adult: 20-35 years; middle adult: 35-50 years; old adult: | ||||
269 | 50 + years. In some cases, particularly with older publications, the | ||||
270 | ages of these categories may differ slightly. The age > 55 is | ||||
271 | sometimes used for \u2018older adults\u2019 in the Japanese | ||||
272 | literature. Cases where the same values are reported for minimum and | ||||
273 | maximum individual ages represent average estimated age. Some of the | ||||
274 | studies used here report very precise age estimates for sub-adults. In | ||||
275 | such cases our dataset follows these estimates, which are derived from | ||||
276 | different methods described in the studies concerned.\r\n\r\nThe | ||||
277 | chronological range of the sample is given by a minimum age | ||||
278 | (Min_chronology age (95%)) and maximum age (Max_chronology age (95%)) | ||||
279 | in years BC and AD with years BC expressed by negative numbers. Age | ||||
280 | assignment followed a hierarchical approach. Whenever available we | ||||
281 | employed direct dates from samples (e.g. radiocarbon dates, in which | ||||
282 | the calibrated 95% range is reported) or from coeval samples from the | ||||
283 | same archaeological context. If necessary, corrections for aquatic | ||||
284 | marine radiocarbon reservoir effects were applied on direct | ||||
285 | radiocarbon measurements of human bones (see below). A dataset field | ||||
286 | (Dietary_ model_selection) identifies the type of Bayesian model | ||||
287 | employed to estimate the dietary contributions from marine carbon.. If | ||||
288 | no secure dating was available from the sample context, we employed | ||||
289 | the site\u2019s chronology given usually in the archaeological report. | ||||
290 | If this was also not available, we employed the full cultural range to | ||||
291 | which the sample was assigned. A field was used to identify the type | ||||
292 | of employed dating method (Dating_ method). Also included were fields | ||||
293 | for uncalibrated direct radiocarbon dates on sample (14C), its | ||||
294 | uncertainty (14C unc). Period tags are also used to provide | ||||
295 | traditional chronological information (Period_ | ||||
296 | tags).\r\n\r\nMeasurements of stable carbon (delta_ 13C_ coll) and | ||||
297 | nitrogen (delta_ 15N_ coll) isotopic ratios in bone collagen and hair | ||||
298 | keratin are reported together with measurements quality indicators, | ||||
299 | the percentage of elemental carbon (%C), the percentage of elemental | ||||
300 | nitrogen (%N), the carbon to nitrogen atomic ratio (C/N), and the | ||||
301 | collagen yield for bone samples (Collagen_ yield).\r\n\r\nA reference | ||||
302 | in the format author(s)/year of publication/title identified the | ||||
303 | source publication or publications from where the data was collected | ||||
304 | (Reference), in addition to a link to the publication whenever | ||||
305 | available (Link), a Digital object identifier as a persistent | ||||
306 | identifier DOI (DOI), and the publication date or dates (Publication_ | ||||
307 | date). Macrons were not used for Japanese titles in the list.", | ||||
308 | "format": "CSV", | ||||
309 | "hash": "", | ||||
310 | "id": "75920f42-db23-4d72-b7c8-40a51355c859", | ||||
311 | "last_modified": "2021-05-31T16:28:37.142680", | ||||
312 | "metadata_modified": "2021-05-31T16:28:37.171706", | ||||
313 | "mimetype": "text/csv", | ||||
314 | "mimetype_inner": null, | ||||
315 | "name": "Stable isotope measurements for archaeological humans | ||||
316 | in Japan v. 2 (CSV)", | ||||
317 | "package_id": "8378ee13-0cb9-4fec-95aa-d64f52d21fd0", | ||||
318 | "position": 2, | ||||
319 | "resource_type": null, | ||||
320 | "size": 800486, | ||||
321 | "state": "active", | ||||
322 | "url": | ||||
323 | 0f42-db23-4d72-b7c8-40a51355c859/download/japan-human-si-data-v2.csv", | ||||
324 | "url_type": "upload" | ||||
229 | } | 325 | } | ||
230 | ], | 326 | ], | ||
231 | "state": "active", | 327 | "state": "active", | ||
232 | "tags": [ | 328 | "tags": [ | ||
233 | { | 329 | { | ||
234 | "display_name": "Archaeology", | 330 | "display_name": "Archaeology", | ||
235 | "id": "added2c9-60e3-4991-bea0-38241d803b73", | 331 | "id": "added2c9-60e3-4991-bea0-38241d803b73", | ||
236 | "name": "Archaeology", | 332 | "name": "Archaeology", | ||
237 | "state": "active", | 333 | "state": "active", | ||
238 | "vocabulary_id": null | 334 | "vocabulary_id": null | ||
239 | }, | 335 | }, | ||
240 | { | 336 | { | ||
241 | "display_name": "Database", | 337 | "display_name": "Database", | ||
242 | "id": "e36afad0-91c1-4df0-966e-8bdda7d5ffb0", | 338 | "id": "e36afad0-91c1-4df0-966e-8bdda7d5ffb0", | ||
243 | "name": "Database", | 339 | "name": "Database", | ||
244 | "state": "active", | 340 | "state": "active", | ||
245 | "vocabulary_id": null | 341 | "vocabulary_id": null | ||
246 | }, | 342 | }, | ||
247 | { | 343 | { | ||
248 | "display_name": "Diet", | 344 | "display_name": "Diet", | ||
249 | "id": "b0efb573-f810-4312-8b3b-38fb46804eef", | 345 | "id": "b0efb573-f810-4312-8b3b-38fb46804eef", | ||
250 | "name": "Diet", | 346 | "name": "Diet", | ||
251 | "state": "active", | 347 | "state": "active", | ||
252 | "vocabulary_id": null | 348 | "vocabulary_id": null | ||
253 | }, | 349 | }, | ||
254 | { | 350 | { | ||
255 | "display_name": "Japan", | 351 | "display_name": "Japan", | ||
256 | "id": "17fe52f9-59d3-434b-97f2-1289242442cc", | 352 | "id": "17fe52f9-59d3-434b-97f2-1289242442cc", | ||
257 | "name": "Japan", | 353 | "name": "Japan", | ||
258 | "state": "active", | 354 | "state": "active", | ||
259 | "vocabulary_id": null | 355 | "vocabulary_id": null | ||
260 | }, | 356 | }, | ||
261 | { | 357 | { | ||
262 | "display_name": "Stable isotopes", | 358 | "display_name": "Stable isotopes", | ||
263 | "id": "3519702f-70f2-4d36-acb2-9c02bb24c492", | 359 | "id": "3519702f-70f2-4d36-acb2-9c02bb24c492", | ||
264 | "name": "Stable isotopes", | 360 | "name": "Stable isotopes", | ||
265 | "state": "active", | 361 | "state": "active", | ||
266 | "vocabulary_id": null | 362 | "vocabulary_id": null | ||
267 | } | 363 | } | ||
268 | ], | 364 | ], | ||
269 | "temporal_end": "1868", | 365 | "temporal_end": "1868", | ||
270 | "temporal_start": "-20000", | 366 | "temporal_start": "-20000", | ||
271 | "title": "ARCHIPELAGO human stable isotope database", | 367 | "title": "ARCHIPELAGO human stable isotope database", | ||
272 | "type": "dataset", | 368 | "type": "dataset", | ||
273 | "url": null, | 369 | "url": null, | ||
274 | "version": "" | 370 | "version": "" | ||
275 | } | 371 | } |